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BGI-RIS FTP Site |
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Genomic sequences for the rice genomes |
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Superscaffold of Beijing indica FTP1 FTP2 |
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Full release sequence and daily updates for Beijing indica Superscaffold |
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Superscaffold of Syngenta japonica FTP1 FTP2 |
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Full release sequence and daily updates for Syngenta japonica Superscaffold |
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Scaffold of Beijing indica FTP1 FTP2 |
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Full release sequence and daily updates for Beijing indica Scaffold |
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Scaffold of Syngenta japonica FTP1 FTP2 |
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Full release sequence and daily updates for Syngenta japonica Scaffold |
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Contig of Beijing indica FTP1 FTP2 |
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Full release sequence and daily updates for Beijing indica Contig |
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Contig of Syngenta japonica FTP1 FTP2 |
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Full release sequence and daily updates for Syngenta japonica Contig |
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Pseudomolecules of IRGSP japonica (build 4) FTP1 FTP2 |
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Full release sequence and daily updates for japonica (IRGSP) Chromosome. |
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Annotation data for the rice genomes |
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Markers Beijing indica Syngenta japonica |
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BAC ends Beijing indica Syngenta japonica |
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Repeats Beijing indica Syngenta japonica |
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nr-KOME cDNAs japonica cDNAs |
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Gene sets from PLoS 2005 (Yu J, Wang J, et al. 2005. The genomes of Oryza sativa: a history of duplications. PLoS Biol 3: e38)
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BGF genes Beijing indica Syngenta japonica |
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FgeneSH genes Beijing indica Syngenta japonica |
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Pre-publication gene sets (Re-annotation of the rice genomes by selective pre-masking of intergenic transposable elements)
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BGF genes Beijing indica Syngenta japonica IRGSP japonica (build 4) |
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Fgenesh genes Beijing indica Syngenta japonica IRGSP japonica (build 4) |
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SNPs between indica and japonica subspecies
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Indica vs Syngenta Genome alignment SNP/Indel information |
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Indica vs IRGSP Genome alignment SNP/Indel information |
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Instruction of file formats Readme |
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Transcriptome Data
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SAGE Instruction SAGE data
Potential origin
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Tools
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RePS FTP1 FTP2 |
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ReAS FTP1 FTP2 |
