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BGI-RIS FTP Site |
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Re-annotation of the rice genomes by selective pre-masking of intergenic transposable elements |
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Original genome 9311 Syngenta IRGSP build 4 |
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Latest version of the genomic sequences for all the rice assemblies
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TE-Msked genome 9311 Syngenta IRGSP build 4 |
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Genomic sequences masked by intergenic transposable elements ( Repbase Class I and II TEs, combined with ReAS TEs which size is larger than 500bp)
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Fgenesh genes 9311 Syngenta IRGSP build 4 |
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Fgenesh predicted genes on the pre-masked genome
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BGF genes 9311 Syngenta IRGSP build 4 |
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BGF predicted genes on the pre-masked genome
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Genomic sequences for the rice genomes |
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Chromosome of indica (93-11) FTP1 FTP2 |
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Full release sequence and daily updates for indica (93-11) Chromosome. |
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Chromosome of japonica (RGP) FTP1 FTP2 |
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Full release sequence and daily updates for japonica (RGP) Chromosome. |
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Superscaffold of indica (93-11) FTP1 FTP2 |
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Full release sequence and daily updates forindica (93-11) Superscaffold |
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BACs of japonica (RGP) FTP1 FTP2 |
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Full release sequence and daily updates for japonica (RGP) BAC |
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Scaffold of indica (93-11) FTP1 FTP2 |
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Full release sequence and daily updates for indica (93-11) Scaffold |
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Contig of indica (93-11) FTP1 FTP2 |
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Full release sequence and daily updates forindica (93-11) Contig |
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BGF of indica (93-11) FTP1 FTP2 |
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Full release sequence and daily updates for indica (93-11) BGF |
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BGF of japonica (RGP) FTP1 FTP2 |
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Full release sequence and daily updates for japonica (RGP) BGF |
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FgeneSH predicted genes of indica (93-11) FTP1 FTP2 |
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Full release of sequences and daily updates for FgeneSH predicted genes of indica (93-11) FgeneSH |
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FgeneSH predicted genes of japonica (RGP) FTP1 FTP2 |
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Full release of sequences and daily updates for FgeneSH predicted genes of japonica (RGP) FgeneSH |
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cDNA FTP1 FTP2 |
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Full release sequence and daily updates for cDNA |
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Marker FTP1 FTP2 |
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Sequence data of markers in the rice genomes. |
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Annotation data to the rice genome sequences, including markers, BAC ends, repeats, cDNAs, BGF and FgeneSH predicted genes. |
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Markers 9311 RGP |
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Repeats 9311 RGP |
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Japonica cDNAs RGP |
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BGF 9311 RGP |
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FgeneSH predicted genes 9311 RGP |
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Tools
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RePS FTP1 FTP2 |
